RCC100

Pelagomonas_calceolata

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Yes - (D) No information on country of origin, resource sampled pre-NP
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IDENTITY

Pelagomonas_calceolata

Domain: 
Eukaryota
Division: 
Heterokontophyta
Class: 
Pelagophyceae
Order: 
Pelagomonadales
Family: 
Pelagomonadaceae
Genus: 
Pelagomonas
Strain name: 
CCMP1214
Strain name synonyms: 
MC1, Lewin#1082
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Length: 
3.00
Cell motility: 
flagellated
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
North Pacific Central gyre
Sampling country: 
International waters
Sampling water type: 
marine
Sampling ecosystem: 
pelagic
Sampling cruise: 
Southtow expedition
Sampling date: 
Saturday, February 17, 1973
Isolation by: 
Lewin R.
CULTURE CONDITIONS
RCC medium: 
K
RCC temperature: 
20.00
RCC transfer period weeks: 
3.00
RCC light: 
4
Remark: 
Transcriptome sequence is planned in project Oceanomics (2013).
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Sunday, November 1, 1998
Sampling by: 
Lewin R.
Deposit to rcc by: 
CCMP

Sequences available for this RCC strain

GenBank Accession Gene name Gene location Genbank organism Description
U14389 18S rRNA nucleus Pelagomonas calceolata 18S small subunit rRNA gene.
AY702122 16S rRNA plastid RCC100
EU851954 psbA plastid Pelagomonas calceolata strain RCC100 photosystem II protein D1 (psbA) gene, partial cds
AF289047 ITS rRNA nucleus Pelagomonas calceolata internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence
PRJEB47931 Genome nucleus Pelagomonas calceolatea
ERR3497221 Transcriptome Pelagomonas calceolata
ERR3497222 Transcriptome Pelagomonas calceolata

Associated references

Displaying 1 - 5 of 5
Uwizeye C, Decelle J, Jouneau P-H, Gallet B, Keck J-baptiste, Schwab Y, Schoehn G, Zeeman SC, Falconet D, Finazzi G et al..  2020.  In-cell quantitative structural imaging of phytoplankton using 3D electron microscopy. bioRxiv. :2020.05.19.104166. PDF icon Download pdf (3.78 MB)
Marie D, Rigaut-Jalabert F, Vaulot D.  2014.  An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples. Cytometry. 85:962–968. PDF icon Download pdf (545.78 KB)
Uwizeye C, Decelle J, Jouneau P-H, Flori S, Gallet B, Keck J-baptiste, Dal Bo D, Moriscot C, Seydoux C, Chevalier F et al..  2021.  Morphological bases of phytoplankton energy management and physiological responses unveiled by 3D subcellular imaging. Nature Communications. 12:1–12. PDF icon Download pdf (4.83 MB)
Guérin N, Ciccarella M, Flamant E, Frémont P, Mangenot S, Istace B, Noel B, Belser C, Bertrand L, Labadie K et al..  2022.  Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence. Communications Biology. 5:1–14. PDF icon Download pdf (4.25 MB)
Wang J, Zhou S, Curson A, Vieira A, Walsham K, Monaco S, Li C-Y, Rivera PPaolo, Di Wang X-, Hanwell L et al..  2023.  Novel dimethylsulfoniopropionate biosynthesis enzymes in diverse marine bacteria, cyanobacteria and abundant algae. PDF icon Download pdf (916.07 KB)