RCC2378

Synechococcus_sp

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Are users allowed to use this biological resource without applying for formal ABS authorization?
Yes - (D) No information on country of origin, resource sampled pre-NP

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade WPC1
Strain name: 
A15-127 Clonal
Strain name synonyms: 
A15-127
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Atlantic Ocean
Sampling country: 
International waters
Sampling ecosystem: 
pelagic
Sampling cruise: 
AMT 15
Sampling station: 
31
Sampling depth (m): 
45
Sampling date: 
Friday, October 22, 2004
Isolation by: 
Zwirglmaier K.
Isolation method: 
enrichment, serial platings
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
22.00
RCC transfer period weeks: 
4.00
RCC light: 
80
Phenotype pigment: 
Syn type 3c
Remark: 
Genome sequenced by Genoscope
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Tuesday, December 7, 2010
Mother strain: 
RCC1100
Sampling CTD: 
94
Sampling bottle: 
13
Sampling by: 
Zwirglmaier K.
Deposit to RCC date: 
Friday, December 3, 2010
Deposit to rcc by: 
F. Humily
Purification date: 
Wednesday, December 1, 2010
Purification by: 
Florian Humily
Purification method: 
One colony on plate

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KY853876 rpmH Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L34 (rpmH) gene, complete cds
KY854510 rplL Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L7/L12 (rplL) gene, complete cds
KY855006 rplD Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L4 (rplD) gene, complete cds
MG014449 ApcB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 allophycocyanin beta chain (apcB) gene, complete cds
KY853877 rpmI Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L35 (rpmI) gene, complete cds
KY854541 rpsJ Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S10 (rpsJ) gene, complete cds
KY855037 rplC Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L3 (rplC) gene, complete cds
MG014480 apcD Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 allophycocyanin alpha-B chain (apcD) gene, complete cds
KY853878 rmpJ Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L36 (rmpJ) gene, complete cds
KY854572 rpsG Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S7 (rpsG) gene, complete cds
KY855068 rpsA1 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S1 (rpsA1) gene, complete cds
MG014511 apcF Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 allophycocyanin beta-18 chain (apcF) gene, complete cds
KY853879 rpsK Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S11 (rpsK) gene, complete cds
KY854603 rpsI Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S9 (rpsI) gene, complete cds
KY855099 rplS Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L19 (rplS) gene, complete cds
MG014554 cpeY Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KY853880 rpsL Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S12 (rpsL) gene, complete cds
KY854634 rplM Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L13 (rplM) gene, complete cds
KY855130 rpsA2 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S1 (rpsA2) gene, complete cds
MG014581 mpeB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 C-phycoerythrin class II beta chain (mpeB) and C-phycoerythrin class II alpha chain (mpeA) genes, complete cds
KY853881 rpsN Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S14 (rpsN) gene, complete cds
KY854665 rpsM Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S13 (rpsM) gene, complete cds
KY855161 rpsD Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S4 (rpsD) gene, complete cds
MG014601 mpeY Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 putative phycobilin:C-phycoerythrin II lyase (mpeY) gene, complete cds
KF528766 cpeB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. A15-127 C-phycoerythrin class I subunit beta (cpeB) and C-phycoerythrin class I subunit alpha (cpeA) genes, complete cds
KY853882 rpsO Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S15 (rpsO) gene, complete cds
KY854696 rpsE Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S5 (rpsE) gene, complete cds
KY855192 rpsP Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S16 (rpsP) gene, complete cds
CP047948 Genome Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus Synechococcus sp. A15-127 chromosome, complete genome
KF528804 rpcB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. A15-127 R-phycocyanin II beta subunit (rpcB) and R-phycocyanin II alpha subunit (rpcA) genes, complete cds
KY853883 rpsQ Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S17 (rpsQ) gene, complete cds
KY854727 rplF Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L6 (rplF) gene, complete cds
KY855223 rpsR Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S18 (rpsR) gene, complete cds
KY853868 rplQ Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L17 (rplQ) gene, complete cds
KY853884 rpsS Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S19 (rpsS) gene, complete cds
KY854758 rpsH Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S8 (rpsH) gene, complete cds
KY855254 rpsB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S2 (rpsB) gene, complete cds
KY853869 rplR Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L18 (rplR) gene, complete cds
KY853885 rpsU Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S21 (rpsU) gene, complete cds
KY854789 rplE Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L5 (rplE) gene, complete cds
KY855285 rpsT Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S20 (rpsT) gene, complete cds
KY853870 rplT Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L20 (rplT) gene, complete cds
KY854324 rplO Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L15 (rplO) gene, complete cds
KY854820 rplX Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L24 (rplX) gene, complete cds
KY855316 rpmA Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L27 (rpmA) gene, complete cds
KY853871 rplV Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L22 (rplV) gene, complete cds
KY854355 rpsF Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S6 (rpsF) gene, complete cds
KY854851 rplN Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L14 (rplN) gene, complete cds
KY855347 ycf65 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 ribosomal protein Ycf65 (ycf65) gene, complete cds
KY853872 rpmB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L28 (rpmB) gene, complete cds
KY854386 rplI Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L9 (rplI) gene, complete cds
KY854882 rplP Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L16 (rplP) gene, complete cds
KY860796 desC3 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 delta-9 fatty acid desaturase (desC3) gene, complete cds
KY853873 rpmE Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L31 (rpmE) gene, complete cds
KY854417 rplK Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L11 (rplK) gene, complete cds
KY854913 rpsC Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 30S ribosomal protein S3 (rpsC) gene, complete cds
KY860825 desA3 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 delta-12 fatty acid desaturase (desA3) gene, complete cds
KY853874 rmpF Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L32 (rmpF) gene, complete cds
KY854448 rplA Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L1 (rplA) gene, complete cds
KY854944 rplB Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L2 (rplB) gene, complete cds
KY860849 desA2 Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 delta-12 fatty acid desaturase (desA2) gene, complete cds
KY853875 rmpG Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L33 (rmpG) gene, complete cds
KY854479 rplJ Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L10 (rplJ) gene, complete cds
KY854975 rplW Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 50S ribosomal protein L23 (rplW) gene, complete cds
MG014418 apcA Synechococcus sp. A15-127 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. A15-127 allophycocyanin alpha chain (apcA) gene, complete cds