RCC2433

Synechococcus_sp

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade VII
Strain name: 
NOUM97013 Clonal
Strain name synonyms: 
NOUM97013
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling regional sea: 
Equatorial Pacific
Sampling country: 
France
Sampling ecosystem: 
pelagic
Sampling cruise: 
Ebene
Sampling depth (m): 
0
Sampling date: 
Tuesday, November 19, 1996
Isolation by: 
Blanchot J., Boulben S.
CULTURE CONDITIONS
RCC medium: 
RCC temperature: 
22.00
RCC transfer period weeks: 
3.00
RCC light: 
100
Phenotype pigment: 
Syn type 3a
Remark: 
Genome sequenced by Genoscope
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, January 13, 2011
Mother strain: 
RCC68
Sampling by: 
Blanchot J
Isolation growth temperature: 
25.00
Deposit to RCC date: 
Thursday, January 13, 2011
Deposit to rcc by: 
F. Humily
Purification date: 
Thursday, January 13, 2011
Purification by: 
Florian Humily
Purification method: 
One colony on plate

Sequences available for this RCC strain

GenBank Accession Gene name Genbank organism Genbank taxonomy Description
KF528781 cpeB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. NOUM97013 C-phycoerythrin class I subunit beta (cpeB) and C-phycoerythrin class I subunit alpha (cpeA) genes, complete cds
KY854115 rpsN Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S14 (rpsN) gene, complete cds
KY854678 rpsM Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S13 (rpsM) gene, complete cds
KY855174 rpsD Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S4 (rpsD) gene, complete cds
MG014545 cpeY Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 phycoerythrobilin:Cys-82 alpha-phycoerythrin lyase CpeY subunit (cpeY) gene, complete cds
KF528819 rpcB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. NOUM97013 R-phycocyanin II beta subunit (rpcB) and R-phycocyanin II alpha subunit (rpcA) genes, complete cds
KY854116 rpsO Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S15 (rpsO) gene, complete cds
KY854709 rpsE Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S5 (rpsE) gene, complete cds
KY855205 rpsP Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S16 (rpsP) gene, complete cds
MG014570 mpeB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 C-phycoerythrin class II beta chain (mpeB) and C-phycoerythrin class II alpha chain (mpeA) genes, complete cds
KU377982 petB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus Synechococcus sp. NOUM97013 cytochrome b6 (petB) gene, complete cds
KY854117 rpsQ Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S17 (rpsQ) gene, complete cds
KY854740 rplF Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L6 (rplF) gene, complete cds
KY855236 rpsR Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S18 (rpsR) gene, complete cds
MG014593 mpeY Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 putative phycobilin:C-phycoerythrin II lyase (mpeY) gene, complete cds
KY854102 rplQ Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L17 (rplQ) gene, complete cds
KY854118 rpsS Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S19 (rpsS) gene, complete cds
KY854771 rpsH Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S8 (rpsH) gene, complete cds
KY855267 rpsB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S2 (rpsB) gene, complete cds
CP047941 Genome Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; unclassified Synechococcus Synechococcus sp. NOUM97013 chromosome, complete genome
KY854103 rplR Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L18 (rplR) gene, complete cds
KY854119 rpsU Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S21 (rpsU) gene, complete cds
KY854802 rplE Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L5 (rplE) gene, complete cds
KY855298 rpsT Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S20 (rpsT) gene, complete cds
KY854104 rplT Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L20 (rplT) gene, complete cds
KY854337 rplO Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L15 (rplO) gene, complete cds
KY854833 rplX Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L24 (rplX) gene, complete cds
KY855329 rpmA Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L27 (rpmA) gene, complete cds
KY854105 rplV Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L22 (rplV) gene, complete cds
KY854368 rpsF Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S6 (rpsF) gene, complete cds
KY854864 rplN Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L14 (rplN) gene, complete cds
KY855360 ycf65 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 ribosomal protein Ycf65 (ycf65) gene, complete cds
KY854106 rpmB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L28 (rpmB) gene, complete cds
KY854399 rplI Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L9 (rplI) gene, complete cds
KY854895 rplP Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L16 (rplP) gene, complete cds
KY860809 desC3 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 delta-9 fatty acid desaturase (desC3) gene, complete cds
KY854107 rpmE Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L31 (rpmE) gene, complete cds
KY854430 rplK Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L11 (rplK) gene, complete cds
KY854926 rpsC Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S3 (rpsC) gene, complete cds
KY860837 desA3 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 delta-12 fatty acid desaturase (desA3) gene, complete cds
KY854108 rmpF Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L32 (rmpF) gene, complete cds
KY854461 rplA Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L1 (rplA) gene, complete cds
KY854957 rplB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L2 (rplB) gene, complete cds
KY860857 desA2 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 delta-12 fatty acid desaturase (desA2) gene, complete cds
KY854109 rmpG Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L33 (rmpG) gene, complete cds
KY854492 rplJ Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L10 (rplJ) gene, complete cds
KY854988 rplW Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L23 (rplW) gene, complete cds
KY860874 desC4 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 delta-9 fatty acid desaturase (desC4) gene, complete cds
KY854110 rpmH Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L34 (rpmH) gene, complete cds
KY854523 rplL Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L7/L12 (rplL) gene, complete cds
KY855019 rplD Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L4 (rplD) gene, complete cds
MG014405 apcA Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 allophycocyanin alpha chain (apcA) gene, complete cds
KY854111 rpmI Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L35 (rpmI) gene, complete cds
KY854554 rpsJ Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S10 (rpsJ) gene, complete cds
KY855050 rplC Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L3 (rplC) gene, complete cds
MG014436 ApcB Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 allophycocyanin beta chain (apcB) gene, complete cds
KY854112 rmpJ Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L36 (rmpJ) gene, complete cds
KY854585 rpsG Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S7 (rpsG) gene, complete cds
KY855081 rpsA1 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S1 (rpsA1) gene, complete cds
MG014467 apcD Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 allophycocyanin alpha-B chain (apcD) gene, complete cds
KY854113 rpsK Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S11 (rpsK) gene, complete cds
KY854616 rpsI Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S9 (rpsI) gene, complete cds
KY855112 rplS Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L19 (rplS) gene, complete cds
MG014498 apcF Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 allophycocyanin beta-18 chain (apcF) gene, complete cds
KY854114 rpsL Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S12 (rpsL) gene, complete cds
KY854647 rplM Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 50S ribosomal protein L13 (rplM) gene, complete cds
KY855143 rpsA2 Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 30S ribosomal protein S1 (rpsA2) gene, complete cds
MG014531 cpeF Synechococcus sp. NOUM97013 Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus Synechococcus sp. NOUM97013 putative phycoerythrin:phycoerythrobilin lyase (cpeF) gene, complete cds