RCC references

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A
Abida H, Ruchaud S, Rios L, Humeau A, Probert I, de Vargas C, Bach S, Bowler C.  2013.  Bioprospecting marine plankton. Marine Drugs. 11:4594–4611.PDF icon Abida et al_2013_Bioprospecting marine plankton.pdf (892.28 KB)
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Balzano S, Gourvil P, Siano R, Chanoine M, Marie D, Lessard S, Sarno D, Vaulot D.  2012.  Diversity of cultured photosynthetic flagellates in the North East Pacific and Arctic Oceans in summer. Biogeosciences. 9:4553–4571.PDF icon Balzano et al_2012_Diversity of cultured photosynthetic flagellates in the North East Pacific and.pdf (6.19 MB)
Balzano S, Marie D, Gourvil P, Vaulot D.  2012.  Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples. The ISME journal. 6:1480–1498.PDF icon Balzano et al_2012_Composition of the summer photosynthetic pico and nanoplankton communities in.pdf (1.01 MB)
Bellec L, Clerissi C, Edern R, Foulon E, Simon N, Grimsley N, Desdevises Y.  2014.  Cophylogenetic interactions between marine viruses and eukaryotic picophytoplankton. BMC Evolutionary Biology. 14:59.PDF icon Bellec et al_2014_Cophylogenetic interactions between marine viruses and eukaryotic.pdf (496.16 KB)
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Dia A, Guillou L, Mauger S, Bigeard E, Marie D, Valero M, Destombe C.  2014.  Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate Alexandrium minutum. Molecular Ecology. 23:549–560.PDF icon Dia et al_2014_Spatiotemporal changes in the genetic diversity of harmful algal blooms caused.pdf (764.4 KB)
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Foulon E, Not F, Jalabert F, Cariou T, Massana R, Simon N.  2008.  Ecological niche partitioning in the picoplanktonic green alga Micromonas pusilla: evidence from environmental surveys using phylogenetic probes. Environmental Microbiology. 10:2433–2443.PDF icon Foulon et al_2008_Ecological niche partitioning in the picoplanktonic green alga Micromonas.pdf (2.02 MB)
Fuller NJ, Campbell C, Allen DJ, Pitt FD, Le Gall F, Vaulot D, Scanlan DJ.  2006.  Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquatic Microbial Ecology. 43:79–93.PDF icon Fuller et al_2006_Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the.pdf (427.42 KB)
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Guillou L, Eikrem W, Chrétiennot-Dinet M.-J., Le Gall F, Massana R, Romari K, Pedrós-Alió C, Vaulot D.  2004.  Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems. Protist. 155:193–214.PDF icon Guillou et al_2004_Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA.pdf (700.86 KB)
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J et al..  2013.  The protist ribosomal reference database (PR2): a catalog of unicellular eukaryote small SubUnit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41:D597–D604.PDF icon Guillou et al_2013_The protist ribosomal reference database (PR2).pdf (266.2 KB)
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Henley WJ, Hironaka JL, Guillou L, Buchheim MA, Buchheim JA, Fawley MW, Fawley KP.  2004.  Phylogenetic analysis of the Nannochloris-like' algae and diagnoses of Picochlorum oklahomensis gen. et sp nov (Trebouxiophyceae, Chlorophyta). Phycologia. 43:641–652.PDF icon Henley et al_2004_Phylogenetic analysis of the '¡i¿Nannochloris¡-i¿-like' algae and diagnoses of.pdf (3.27 MB)
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Ichinomiya M, A Santos Ldos, Gourvil P, Yoshikawa S, Kamiya M, Ohki K, Audic S, de Vargas C, Vaulot D, Kuwata A.  2016.  Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms. The ISME Journal. in pressPDF icon Ichinomiya et al. - Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms.pdf (756.64 KB)
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Jeanthon C, Boeuf D, Dahan O, Le Gall F, Garczarek L, Bendif EMahdi, Lehours A-C.  2011.  Diversity of cultivated and metabolically active aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea. Biogeosciences. 8:1955–1970.PDF icon Jeanthon et al_2011_Diversity of cultivated and metabolically active aerobic anoxygenic.pdf (1.6 MB)
Jouenne F, Probert I, Vaulot D.  2008.  Plankton taxonomy in the computer age. Cahiers de Biologie Marine. 49:355–367.PDF icon Jouenne et al_2008_Plankton taxonomy in the computer age.pdf (203.92 KB)
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Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, E Armbrust V, Archibald JM, Bharti AK, Bell CJ et al..  2014.  The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS biology. 12:e1001889.PDF icon Keeling et al_2014_The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP).pdf (353.97 KB)
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Latasa M, Scharek R, Le Gall F, Guillou L, Le Gall F.  2004.  Pigment suites and taxonomic groups in Prasinophyceae. Journal of Phycology. 40:1149–1155.PDF icon Latasa et al_2004_Pigment suites and taxonomic groups in Prasinophyceae.pdf (32 KB)
Le Gall F, Rigaut-Jalabert F, Marie D, Garczareck L, Viprey M, Godet A, Vaulot D.  2008.  Picoplankton diversity in the south-east pacific ocean from cultures. Biogeosciences. 5:203–214.
Lepelletier F, Karpov SA, Le Panse S, Bigeard E, Skovgaard A, Jeanthon C, Guillou L.  2014.  Parvilucifera rostrata sp. nov., a novel parasite in the phylum Perkinsozoa that infects the toxic dinoflagellate Alexandrium minutum (Dinophyceae). Protist. 165:31–49.PDF icon Lepelletier et al_2014_Parvilucifera rostrata sp.pdf (17.84 MB)
Lepelletier F, Karpov SA, Alacid E, Le Panse S, Bigeard E, Garcés E, Jeanthon C, Guillou L.  2014.  Dinomyces arenysensis gen. et sp. nov. (rhizophydiales, dinomycetaceae fam. nov.), a chytrid infecting marine dinoflagellates. Protist. 165:230–244.PDF icon Lepelletier et al_2014_Dinomyces arenysensis gen.pdf (16.28 MB)
Lepere C, Demura M, Kawachi M, Romac S, Probert I, Vaulot D.  2011.  Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations. FEMS Microbiology Ecology. 76:516–523.PDF icon Lepere et al_2011_Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations.pdf (522.37 KB)
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Marie D, Rigaut-Jalabert F, Vaulot D.  2014.  An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples. Cytometry. 85:962–968.PDF icon Marie et al_2014_An improved protocol for flow cytometry analysis of phytoplankton cultures and.pdf (545.78 KB)
Marie D, Simon N, Vaulot D.  2005.  Phytoplankton cell counting by flow cytometry. Algal culturing techniques. :253–267.PDF icon Marie et al_2005_Phytoplankton cell counting by flow cytometry.pdf (518.75 KB)
Meusnier I, Andersen RA, Stern R, Bertrand C, Kuepper F, Brand J, Friedl T, Blackburn S, Dinh D, Acreman J et al..  2009.  DNA barcoding of protists in culture collections. Third international barcode of life conference.
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Ota S, Vaulot D, Le Gall F, Yabuki A, Ishida K.  2009.  Partenskyella glossopodia gen. et sp. nov., the first report of chlorarachniophyte that lacks pyrenoid. Protist. 160:137–150.PDF icon Ota et al_2009_Partenskyella glossopodia gen.pdf (1.74 MB)
Ota S, Kudo A, Ishida K.  2011.  Gymnochlora dimorpha sp. nov., a chlorarachniophyte with unique daughter cell behaviour.. Phycologia. 50:317–326.PDF icon Ota et al_2011_Gymnochlora dimorpha sp.pdf (2.82 MB)
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Probert I, Siano R, Poirier C, Decelle J, Biard T, Tuji A, Suzuki N, Not F.  2014.  Brandtodinium gen. nov. and B. nutricula comb. Nov. (Dinophyceae), a dinoflagellate commonly found in symbiosis with polycystine radiolarians. Journal of Phycology. 50:388–399.PDF icon Probert et al_2014_Brandtodinium gen.pdf (625.03 KB)

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