RCC references

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2011
Gobler CJ, Berry DL, Dyhrman ST, Wilhelm SW, Salamov A, Lobanov AV, Zhang Y, Collier JL, Wurch LL, Kustka AB et al..  2011.  Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Proceedings of the National Academy of Sciences of the United States of America. 108:4352–4357.PDF icon Gobler et al_2011_Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.pdf (931.16 KB)
Gobler CJ, Berry DL, Dyhrman ST, Wilhelm SW, Salamov A, Lobanov AV, Zhang Y, Collier JL, Wurch LL, Kustka AB et al..  2011.  Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Proceedings of the National Academy of Sciences of the United States of America. 108:4352–4357.PDF icon Gobler et al_2011_Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics.pdf (931.16 KB)
Beaufort L, Probert I, de Garidel-Thoron T, Bendif EM, Ruiz-Pino D, Metzl N, Goyet C, Buchet N, Coupel P, Grelaud M et al..  2011.  Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature. 476:80–83.PDF icon Beaufort et al_2011_Sensitivity of coccolithophores to carbonate chemistry and ocean acidification.pdf (621.83 KB)
Beaufort L, Probert I, de Garidel-Thoron T, Bendif EM, Ruiz-Pino D, Metzl N, Goyet C, Buchet N, Coupel P, Grelaud M et al..  2011.  Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature. 476:80–83.PDF icon Beaufort et al_2011_Sensitivity of coccolithophores to carbonate chemistry and ocean acidification.pdf (621.83 KB)
Rokitta SD, de Nooijer LJ, Trimborn S, de Vargas C, Rost B, John U.  2011.  Transcriptome analyses reveal differential gene expression patterns between the life-cycle stages of Emiliania huxleyi (Haptophyta) and reflect specialization to different ecological niches. Journal of Phycology. 47:829–838.PDF icon Rokitta et al_2011_Transcriptome analyses reveal differential gene expression patterns between the.pdf (240 KB)
Rokitta SD, de Nooijer LJ, Trimborn S, de Vargas C, Rost B, John U.  2011.  Transcriptome analyses reveal differential gene expression patterns between the life-cycle stages of Emiliania huxleyi (Haptophyta) and reflect specialization to different ecological niches. Journal of Phycology. 47:829–838.PDF icon Rokitta et al_2011_Transcriptome analyses reveal differential gene expression patterns between the.pdf (240 KB)
Lepere C, Demura M, Kawachi M, Romac S, Probert I, Vaulot D.  2011.  Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations. FEMS Microbiology Ecology. 76:516–523.PDF icon Lepere et al_2011_Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations.pdf (522.37 KB)
2010
Frada M, Young J, Cachão M, Lino S, Martins A, Narciso Á, Probert I, de Vargas C.  2010.  A guide to extant coccolithophores (Calcihaptophycidae, Haptophyta) using light microscopy.. Journal of Nannoplankton Research. 31:58–112.PDF icon Frada et al_2010_A guide to extant coccolithophores (Calcihaptophycidae, Haptophyta) using light.pdf (2.52 MB)
Moreau H, Piganeau G, Desdevises Y, Cooke R, Derelle E, Grimsley N.  2010.  Marine Prasinovirus genomes show low evolutionary divergence and acquisition of protein metabolism genes by horizontal gene transfer. Journal of Virology. 84:12555–12563.PDF icon Moreau et al_2010_Marine Prasinovirus genomes show low evolutionary divergence and acquisition of.pdf (2.2 MB)
Moreau H, Piganeau G, Desdevises Y, Cooke R, Derelle E, Grimsley N.  2010.  Marine Prasinovirus genomes show low evolutionary divergence and acquisition of protein metabolism genes by horizontal gene transfer. Journal of Virology. 84:12555–12563.PDF icon Moreau et al_2010_Marine Prasinovirus genomes show low evolutionary divergence and acquisition of.pdf (2.2 MB)
Siano R, Montresor M, Probert I, Not F, de Vargas C.  2010.  Pelagodinium gen. nov. and P. beii comb. nov., a dinoflagellate symbiont of planktonic foraminifera. Protist. 161:385–399.PDF icon Siano et al_2010_Pelagodinium gen.pdf (1.9 MB)
Liu H, Aris-Brosou S, Probert I, de Vargas C.  2010.  A timeline of the environmental genetics of the haptophytes. Molecular Biology and Evolution. 27:171–176.
2009
Meusnier I, Andersen RA, Stern R, Bertrand C, Kuepper F, Brand J, Friedl T, Blackburn S, Dinh D, Acreman J et al..  2009.  DNA barcoding of protists in culture collections. Third international barcode of life conference.
Scanlan DJ, Ostrowski M, Mazard S, Dufresne A, Garczarek L, Hess WR, Post AF, Hagemann M, Paulsen I, Partensky F.  2009.  Ecological genomics of marine picocyanobacteria. Microbiology and Molecular Biology Reviews. 73:249–299.PDF icon Scanlan et al_2009_Ecological genomics of marine picocyanobacteria.pdf (5.66 MB)
Liu H, Probert I, Uitz J, Claustre H, Aris-Brossou S, Frada M, Not F, de Vargas C.  2009.  Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans. Proceedings of the National Academy of Sciences of the United States of America. 106:12803–12808.PDF icon Liu et al_2009_Extreme diversity in noncalcifying haptophytes explains a major pigment paradox.pdf (1.68 MB)
Worden AZ, Lee J.-H, Mock T, Rouzé P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV et al..  2009.  Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science. 324:268–272.
Worden AZ, Lee J.-H, Mock T, Rouzé P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV et al..  2009.  Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science. 324:268–272.
Worden AZ, Lee J.-H, Mock T, Rouzé P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV et al..  2009.  Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science. 324:268–272.
Monier A, Pagarete A, Allen MJ, Read BA, de Vargas C, Claverie JM, Ogata H.  2009.  Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus. Genome Research. 19:1441–1449.PDF icon Monier et al_2009_Horizontal gene transfer of an entire metabolic pathway between a eukaryotic.pdf (1.14 MB)
Richier S, Kerros ME, de Vargas C, Haramaty L, Falkowski PG, Gattuso JP.  2009.  Light-dependent transcriptional regulation of genes of biogeochemical interest in the diploid and haploid life cycle stages of Emiliania huxleyi. Applied and Environmental Microbiology. 75:3366–3369.PDF icon Richier et al_2009_Light-dependent transcriptional regulation of genes of biogeochemical interest.pdf (272.41 KB)
von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie J-M, de Vargas C.  2009.  Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell. Genome Biology. 10:R114.PDF icon von Dassow et al_2009_Transcriptome analysis of functional differentiation between haploid and.pdf (1.19 MB)
von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie J-M, de Vargas C.  2009.  Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell. Genome Biology. 10:R114.PDF icon von Dassow et al_2009_Transcriptome analysis of functional differentiation between haploid and.pdf (1.19 MB)
2008
Frada M, Probert I, Allen MJ, Wilson WH, de Vargas C.  2008.  The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection. Proceedings of the National Academy of Sciences of the United States of America. 105:15944–15949.PDF icon Frada et al_2008_The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in.pdf (886.03 KB)
Derelle E, Ferraz C, Escande M-L, Eychenié S, Cooke R, Piganeau G, Desdevises Y, Bellec L, Moreau H, Grimsley N.  2008.  Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine unicellular green alga ¡i¿Ostreococcus tauri¡/i¿. PLoS ONE. 3:e2250.PDF icon Derelle et al_2008_Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine.pdf (536.39 KB)
Derelle E, Ferraz C, Escande M-L, Eychenié S, Cooke R, Piganeau G, Desdevises Y, Bellec L, Moreau H, Grimsley N.  2008.  Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine unicellular green alga ¡i¿Ostreococcus tauri¡/i¿. PLoS ONE. 3:e2250.PDF icon Derelle et al_2008_Life-cycle and genome of OtV5, a large DNA virus of the pelagic marine.pdf (536.39 KB)

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