RCC references

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Khan H, Parks N, Kozera C, Curtis BA, Parsons BJ, Bowman S, Archibald JM.  2007.  Plastid genome sequence of the cryptophyte alga Rhodomonas salina CCMP1319: lateral transfer of putative DNA replication machinery and a test of chromist plastid phylogeny. Molecular Biology and Evolution. 24:1832–1842.
Klinger CM, Paoli L, Newby RJ, Wang MYu-Wei, Carroll HD, Leblond JD, Howe CJ, Dacks JB, Bowler C, A Cahoon B et al..  2018.  Plastid transcript editing across dinoflagellate lineages shows lineage-specific application but conserved trends. Genome Biology and Evolution. 10:1019–1038.PDF icon Klinger et al_2018_Plastid transcript editing across dinoflagellate lineages shows.pdf (744.63 KB)
Klinger CM, Paoli L, Newby RJ, Wang MYu-Wei, Carroll HD, Leblond JD, Howe CJ, Dacks JB, Bowler C, A Cahoon B et al..  2018.  Plastid transcript editing across dinoflagellate lineages shows lineage-specific application but conserved trends. Genome Biology and Evolution. 10:1019–1038.PDF icon Klinger et al_2018_Plastid transcript editing across dinoflagellate lineages shows.pdf (744.63 KB)
Avilan L, Lebrun R, Puppo C, Citerne S, Cuiné S, Li-Beisson Y, Menand B, Field B, Gontero B.  2020.  ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum tricornutum. bioRxiv. :2020.03.05.978130.PDF icon Avilan et al_2020_ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum.pdf (635.67 KB)
Avilan L, Lebrun R, Puppo C, Citerne S, Cuiné S, Li-Beisson Y, Menand B, Field B, Gontero B.  2020.  ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum tricornutum. bioRxiv. :2020.03.05.978130.PDF icon Avilan et al_2020_ppGpp influences protein protection, growth and photosynthesis in Phaeodactylum.pdf (635.67 KB)
Clerissi C, Desdevises Y, Grimsley N.  2012.  Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species specific. Journal of Virology. 86:4611–4619.PDF icon Clerissi et al_2012_Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species.pdf (894.33 KB)
Morel A, Ahn Y.-W., Partensky F, Vaulot D, Claustre H.  1993.  Prochlorococcus and Synechococcus: a comparative study of their size, pigmentation and related optical properties. Journal of Marine Research. 51:617–649.PDF icon Morel et al_1993_Prochlorococcus and Synechococcus.pdf (3.66 MB)
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J et al..  2013.  The protist ribosomal reference database (PR2): a catalog of unicellular eukaryote small SubUnit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41:D597–D604.PDF icon Guillou et al_2013_The protist ribosomal reference database (PR2).pdf (266.2 KB)
Akita S, Vieira C, Hanyuda T, Rousseau F, Cruaud C, Couloux A, Heesch S, J. Cock M, Kawai H.  2022.  Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences. Molecular Phylogenetics and Evolution. 168:107408.
Akita S, Vieira C, Hanyuda T, Rousseau F, Cruaud C, Couloux A, Heesch S, J. Cock M, Kawai H.  2022.  Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences. Molecular Phylogenetics and Evolution. 168:107408.
Akita S, Vieira C, Hanyuda T, Rousseau F, Cruaud C, Couloux A, Heesch S, J. Cock M, Kawai H.  2022.  Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences. Molecular Phylogenetics and Evolution. 168:107408.
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Fan X, Batchelor-McAuley C, Yang M, Barton S, Rickaby REM, Bouman HA, Compton RG.  2022.  Quantifying the Extent of Calcification of a Coccolithophore Using a Coulter Counter. Analytical Chemistry. :acs.analchem.2c01971.PDF icon Fan et al. - 2022 - Quantifying the Extent of Calcification of a Cocco.pdf (2.95 MB)
Limardo AJ, Sudek S, Choi CJae, Poirier C, Rii YM, Blum M, Roth R, Goodenough U, Church MJ, Worden AZ.  2017.  Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton. Environmental Microbiology. PDF icon Limardo et al_2017_Quantitative biogeography of picoprasinophytes establishes ecotype.pdf (2.02 MB)
Limardo AJ, Sudek S, Choi CJae, Poirier C, Rii YM, Blum M, Roth R, Goodenough U, Church MJ, Worden AZ.  2017.  Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton. Environmental Microbiology. PDF icon Limardo et al_2017_Quantitative biogeography of picoprasinophytes establishes ecotype.pdf (2.02 MB)
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Farhat S, Le P, Kayal E, Noel B, Bigeard E, Corre E, Maumus F, Florent I, Alberti A, Aury J-M et al..  2021.  Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.. BMC Biology. :1–21.PDF icon Farhat et al_2021_Rapid protein evolution, organellar reductions, and invasive intronic elements.pdf (2.01 MB)
Farhat S, Le P, Kayal E, Noel B, Bigeard E, Corre E, Maumus F, Florent I, Alberti A, Aury J-M et al..  2021.  Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.. BMC Biology. :1–21.PDF icon Farhat et al_2021_Rapid protein evolution, organellar reductions, and invasive intronic elements.pdf (2.01 MB)
Yau S, Caravello G, Fonvieille N, Desgranges E, Moreau H, Grimsley N.  2018.  Rapidity of Genomic Adaptations to Prasinovirus Infection in a Marine Microalga. Viruses. 10:441.PDF icon Yau et al_2018_Rapidity of Genomic Adaptations to Prasinovirus Infection in a Marine Microalga.pdf (3.35 MB)
Roesler C, Uitz J, Claustre H, Boss E, Xing X, Organelli E, Briggs N, Bricaud A, Schmechtig C, Poteau A et al..  2017.  Recommendations for obtaining unbiased chlorophyll estimates from in situ chlorophyll fluorometers: A global analysis of WET Labs ECO sensors. Limnology and Oceanography: Methods. 15:572–585.PDF icon Roesler et al_2017_Recommendations for obtaining unbiased chlorophyll estimates from in situ.pdf (686.25 KB)
Rocap G, Distel DL, Waterbury JB, Chisholm SW.  2002.  Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences. Applied and Environmental Microbiology. 68:1180–1191.PDF icon Rocap et al_2002_Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S.pdf (360.24 KB)
Royer C, Gypens N, Cardol P, Borges AV, Roberty S.  2021.  Response of dimethylsulfoniopropionate (DMSP) and dimethylsulfoxide (DMSO) cell quotas to oxidative stress in three phytoplankton species. Journal of Plankton Research. 43:673–690.PDF icon Royer et al. - 2021 - Response of dimethylsulfoniopropionate (DMSP) and .pdf (1.4 MB)
Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MAkram, Partensky F, Worden AZ.  2017.  Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress. PLOS ONE. 12:e0172135.PDF icon Cuvelier et al_2017_Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet.pdf (3.4 MB)
Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MAkram, Partensky F, Worden AZ.  2017.  Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress. PLOS ONE. 12:e0172135.PDF icon Cuvelier et al_2017_Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet.pdf (3.4 MB)
Pilátová J, Pánek T, Obornik M, Čepička I, Mojzeš P.  2022.  Revisiting biocrystallization: purine crystalline inclusions are widespread in eukaryotes. The ISME Journal. PDF icon Pilátová et al. - 2022 - Revisiting biocrystallization purine crystalline .pdf (4.85 MB)PDF icon 41396_2022_1264_MOESM1_ESM.pdf (3.69 MB)
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de la Broise D, Ventura M, Chauchat L, Guerreiro M, Michez T, Vinet T, Gautron N, Le Grand F, Bideau A, Le Goïc N et al..  2022.  Scale-Up to Pilot of a Non-Axenic Culture of Thraustochytrids Using Digestate from Methanization as Nitrogen Source. Marine Drugs. 20:499.PDF icon de la Broise et al. - 2022 - Scale-Up to Pilot of a Non-Axenic Culture of Thrau.pdf (4.81 MB)
Castillo YM, Forn I, Yau S, Morán XAnxelu G, Alonso-Sáez L, Arandia-Gorostidi N, Vaqué D, Sebastián M.  2021.  Seasonal dynamics of natural Ostreococcus viral infection at the single cell level using VirusFISH. Environmental Microbiology. n/aPDF icon Castillo et al_Seasonal dynamics of natural Ostreococcus viral infection at the single cell.pdf (3.15 MB)

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