RCC2673

Synechococcus_sp

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IDENTITY

Synechococcus_sp

Domain: 
Bacteria
Division: 
Cyanophyta
Class: 
Cyanophyceae
Order: 
Synechococcales
Family: 
Synechococcaceae
Genus: 
Synechococcus
Clade: 
subcluster 5.1 - clade IVa
Strain name: 
CC9902
Strain name synonyms: 
CCMP3074
Authentic culture: 
STATUS
Clonal: 
Axenic: 
Pure: 
Heterotrophic: 
Toxic: 
Symbiotic: 
Transformed: 
MORPHOLOGY
Cell shape: 
coccoid
Length: 
1.00
Cell motility: 
non-motile
ORIGIN
Sampling ocean: 
Pacific Ocean
Sampling site: 
California current
Sampling country: 
USA
Sampling ecosystem: 
coastal
Sampling depth (m): 
5
Sampling date: 
Friday, January 1, 1999
Isolation by: 
Palenik B.
CULTURE CONDITIONS
RCC medium: 
PCR-S11-Red Sea
RCC temperature: 
22.00
RCC transfer period weeks: 
3.00
RCC light: 
80
Phenotype pigment: 
Syn type 3dA
Remark: 
Genome sequenced by JGI
RCC Staff >
Details for RCC staff only
Date entered catalog: 
Thursday, February 9, 2012
Deposit to RCC date: 
Thursday, February 2, 2012
Deposit to rcc by: 
Fran Pitt and Julie Scanlan

Sequences available for this RCC strain

GenBank Accession Gene name Description
CP000097 Genome Synechococcus sp. CC9902

Associated references

Displaying 1 - 5 of 5
Stuart RK, Bundy R, Buck K, Ghassemain M, Barbeau K, Palenik B.  2017.  Copper toxicity response influences mesotrophic S ynechococcus community structure. Environmental Microbiology. 19:756–769. PDF icon Download pdf (1.37 MB)
Doré H, Farrant GK, Guyet U, Haguait J, Humily F, Ratin M, Pitt FD, Ostrowski M, Six C, Brillet-Guéguen L et al..  2020.  Evolutionary mechanisms of long-term genome diversification associated with niche partitioning in marine picocyanobacteria. Frontiers in Microbiology. 11:1–23. PDF icon Download pdf (13.44 MB)
Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P et al..  2018.  Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria. Proceedings of the National Academy of Sciences. in press:201717069. PDF icon Download pdf (3.72 MB)
Sanfilippo JE, Nguyen AA, Garczarek L, Karty JA, Pokhrel S, Strnat JA, Partensky F, Schluchter WM, Kehoe DM.  2019.  Interplay between differentially expressed enzymes contributes to light color acclimation in marine Synechococcus. Proceedings of the National Academy of Sciences. 116:6457–6462.
Harcourt R, Garcia NS, Martiny AC.  2024.  Intraspecific trait variation modulates the temperature effect on elemental quotas and stoichiometry in marine Synechococcus. PLOS ONE. 19:e0292337. PDF icon Download pdf (1.78 MB)