RCC references

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A
Abida H, Ruchaud S, Rios L, Humeau A, Probert I, de Vargas C, Bach S, Bowler C.  2013.  Bioprospecting marine plankton. Marine Drugs. 11:4594–4611.PDF icon Abida et al_2013_Bioprospecting marine plankton.pdf (892.28 KB)
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Beaufort L, Probert I, de Garidel-Thoron T, Bendif EM, Ruiz-Pino D, Metzl N, Goyet C, Buchet N, Coupel P, Grelaud M et al..  2011.  Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature. 476:80–83.PDF icon Beaufort et al_2011_Sensitivity of coccolithophores to carbonate chemistry and ocean acidification.pdf (621.83 KB)
Bendif EMahdi, Probert I, Carmichael M, Romac S, Hagino K, de Vargas C.  2014.  Genetic delineation between and within the widespread coccolithophore morpho-species Emiliania huxleyi and Gephyrocapsa oceanica (Haptophyta). Journal of Phycology. 50:140–148.PDF icon Bendif et al_2014_Genetic delineation between and within the widespread coccolithophore.pdf (722.8 KB)
Bendif EMahdi, Probert I, Schroeder DC, de Vargas C.  2013.  On the description of Tisochrysis lutea gen . nov . sp . nov . and Isochrysis nuda sp. nov. in the Isochrysidales, and the transfer of Dicrateria to the Prymnesiales (Haptophyta). Journal of Applied Phycology. 25:1763–1776.PDF icon Bendif et al. - On the description of Tisochrysis lutea gen . nov . sp . nov . and Isochrysis nuda sp. nov. in the Isochrysidales, and t.pdf (944.03 KB)
Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP et al..  2008.  The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature. 456:239–244.PDF icon Bowler et al_2008_The Phaeodactylum genome reveals the evolutionary history of diatom genomes.pdf (436.19 KB)
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Chambouvet A, Berney C, Romac S, Audic S, Maguire F, de Vargas C, Richards T.  2014.  Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments. BMC Microbiology. 14:110.PDF icon Chambouvet et al_2014_Diverse molecular signatures for ribosomally 'active' Perkinsea in marine.pdf (2.29 MB)
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Decelle J, Romac S, Stern RF, Bendif EMahdi, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F et al..  2015.  PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources. 15:1435–1445.PDF icon Decelle et al_2015_PhytoREF.pdf (739.73 KB)
Decelle J, Probert I, Bittner L, Desdevises Y, Colin S, de Vargas C, Gali M, Simo R, Not F.  2012.  An original mode of symbiosis in open ocean plankton. Proceedings of the National Academy of Sciences of the United States of America. 109:18000–18005.
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Frada MJ, Bidle KD, Probert I, de Vargas C.  2012.  In situ survey of life cycle phases of the coccolithophore Emiliania huxleyi (Haptophyta). Environmental Microbiology. 14:1558–1569.PDF icon Frada et al_2012_In situ survey of life cycle phases of the coccolithophore Emiliania huxleyi.pdf (888.67 KB)
Frada M, Probert I, Allen MJ, Wilson WH, de Vargas C.  2008.  The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in response to viral infection. Proceedings of the National Academy of Sciences of the United States of America. 105:15944–15949.PDF icon Frada et al_2008_The “Cheshire Cat” escape strategy of the coccolithophore Emiliania huxleyi in.pdf (886.03 KB)
Frada M, Young J, Cachão M, Lino S, Martins A, Narciso Á, Probert I, de Vargas C.  2010.  A guide to extant coccolithophores (Calcihaptophycidae, Haptophyta) using light microscopy.. Journal of Nannoplankton Research. 31:58–112.PDF icon Frada et al_2010_A guide to extant coccolithophores (Calcihaptophycidae, Haptophyta) using light.pdf (2.52 MB)
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Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J et al..  2013.  The protist ribosomal reference database (PR2): a catalog of unicellular eukaryote small SubUnit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41:D597–D604.PDF icon Guillou et al_2013_The protist ribosomal reference database (PR2).pdf (266.2 KB)
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Hagino K, Bendif EMahdi, Young J, Kogame K, Takano Y, Probert I, Horiguchi T, de Vargas C, Okada H.  2011.  New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliana huxleyi (prymnesiophyceae) from the cox1b-ATP4 genes. Journal of Phycology. 47:1164–1176.
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Ichinomiya M, A Santos Ldos, Gourvil P, Yoshikawa S, Kamiya M, Ohki K, Audic S, de Vargas C, Vaulot D, Kuwata A.  2016.  Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms. The ISME Journal. in pressPDF icon Ichinomiya et al. - Diversity and oceanic distribution of Parmales (Bolidophyceae), a picoplankton group closely related to diatoms.pdf (756.64 KB)
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Lepere C, Demura M, Kawachi M, Romac S, Probert I, Vaulot D.  2011.  Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations. FEMS Microbiology Ecology. 76:516–523.PDF icon Lepere et al_2011_Whole Genome Amplification (WGA) of marine photosynthetic eukaryote populations.pdf (522.37 KB)
Liu H, Probert I, Uitz J, Claustre H, Aris-Brossou S, Frada M, Not F, de Vargas C.  2009.  Extreme diversity in noncalcifying haptophytes explains a major pigment paradox in open oceans. Proceedings of the National Academy of Sciences of the United States of America. 106:12803–12808.PDF icon Liu et al_2009_Extreme diversity in noncalcifying haptophytes explains a major pigment paradox.pdf (1.68 MB)
Liu H, Aris-Brosou S, Probert I, de Vargas C.  2010.  A timeline of the environmental genetics of the haptophytes. Molecular Biology and Evolution. 27:171–176.
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Monier A, Pagarete A, Allen MJ, Read BA, de Vargas C, Claverie JM, Ogata H.  2009.  Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus. Genome Research. 19:1441–1449.PDF icon Monier et al_2009_Horizontal gene transfer of an entire metabolic pathway between a eukaryotic.pdf (1.14 MB)
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Richier S, Kerros ME, de Vargas C, Haramaty L, Falkowski PG, Gattuso JP.  2009.  Light-dependent transcriptional regulation of genes of biogeochemical interest in the diploid and haploid life cycle stages of Emiliania huxleyi. Applied and Environmental Microbiology. 75:3366–3369.PDF icon Richier et al_2009_Light-dependent transcriptional regulation of genes of biogeochemical interest.pdf (272.41 KB)
Rokitta SD, de Nooijer LJ, Trimborn S, de Vargas C, Rost B, John U.  2011.  Transcriptome analyses reveal differential gene expression patterns between the life-cycle stages of Emiliania huxleyi (Haptophyta) and reflect specialization to different ecological niches. Journal of Phycology. 47:829–838.PDF icon Rokitta et al_2011_Transcriptome analyses reveal differential gene expression patterns between the.pdf (240 KB)
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Santos ALopes dos, Gourvil P, Tragin M, Noël M-H, Decelle J, Romac S, Vaulot D.  2017.  Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. The ISME Journal. 11:512–528.PDF icon Lopes dos Santos et al_2017_Diversity and oceanic distribution of prasinophytes clade VII, the dominant.pdf (2.6 MB)
Siano R, Montresor M, Probert I, Not F, de Vargas C.  2010.  Pelagodinium gen. nov. and P. beii comb. nov., a dinoflagellate symbiont of planktonic foraminifera. Protist. 161:385–399.PDF icon Siano et al_2010_Pelagodinium gen.pdf (1.9 MB)
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Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury J-M, de Vargas C, Sieracki M, Iudicone D, Vaulot D et al..  2016.  Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6:37900.PDF icon Vannier et al_2016_Survey of the green picoalga Bathycoccus genomes in the global ocean.pdf (2.44 MB)
von Dassow P, Ogata H, Probert I, Wincker P, Da Silva C, Audic S, Claverie J-M, de Vargas C.  2009.  Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell. Genome Biology. 10:R114.PDF icon von Dassow et al_2009_Transcriptome analysis of functional differentiation between haploid and.pdf (1.19 MB)