RCC references

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2016
Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury J-M, de Vargas C, Sieracki M, Iudicone D, Vaulot D et al..  2016.  Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6:37900.PDF icon Vannier et al_2016_Survey of the green picoalga Bathycoccus genomes in the global ocean.pdf (2.44 MB)
Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury J-M, de Vargas C, Sieracki M, Iudicone D, Vaulot D et al..  2016.  Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6:37900.PDF icon Vannier et al_2016_Survey of the green picoalga Bathycoccus genomes in the global ocean.pdf (2.44 MB)
2015
Varkey D, Mazard S, Ostrowski M, Tetu SG, Haynes P, Paulsen IT.  2015.  Effects of low temperature on tropical and temperate isolates of marine Synechococcus. The ISME Journal. :1–12.PDF icon Varkey et al_2015_Effects of low temperature on tropical and temperate isolates of marine.pdf (1.82 MB)
Simmons MP, Bachy C, Sudek S, van Baren MJ, Sudek L, Ares M, Worden AZ.  2015.  Intron invasions trace algal speciation and reveal nearly identical Arctic and Antarctic Micromonas populations.. Molecular biology and evolution.
Bendif EMahdi, Probert I, Young JR, von Dassow P.  2015.  Morphological and phylogenetic characterization of new gephyrocapsa isolates suggests introgressive hybridization in the Emiliania/Gephyrocapsa complex (haptophyta). Protist. 166:323–336.PDF icon Bendif et al_2015_Morphological and phylogenetic characterization of new gephyrocapsa isolates.pdf (3.35 MB)
J Martínez M, Boere A, Gilg I, van Lent J, Witte H, van Bleijswijk J, Brussaard C.  2015.  New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla reveal a separate phylogenetic group. Aquatic Microbial Ecology. 74:17–28.PDF icon Martinez Martinez et al_2015_New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla.pdf (560.57 KB)
J Martínez M, Boere A, Gilg I, van Lent J, Witte H, van Bleijswijk J, Brussaard C.  2015.  New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla reveal a separate phylogenetic group. Aquatic Microbial Ecology. 74:17–28.PDF icon Martinez Martinez et al_2015_New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla.pdf (560.57 KB)
Decelle J, Romac S, Stern RF, Bendif EMahdi, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F et al..  2015.  PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources. 15:1435–1445.PDF icon Decelle et al_2015_PhytoREF.pdf (739.73 KB)
2014
Marie D, Rigaut-Jalabert F, Vaulot D.  2014.  An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples. Cytometry. 85:962–968.PDF icon Marie et al_2014_An improved protocol for flow cytometry analysis of phytoplankton cultures and.pdf (545.78 KB)
Duanmu D, Bachy C, Sudek S, Wong C-H, Jimenez V, Rockwell NC, Martin SS, Ngan CYee, Reistetter EN, van Baren MJ et al..  2014.  Marine algae and land plants share conserved phytochrome signaling systems. Proceedings of the National Academy of Sciences of the United States of America. 111:15827–15832.
Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, E Armbrust V, Archibald JM, Bharti AK, Bell CJ et al..  2014.  The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS biology. 12:e1001889.PDF icon Keeling et al_2014_The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP).pdf (353.97 KB)
Morrissey J, Sutak R, Paz-Yepes J, Tanaka A, Moustafa A, Veluchamy A, Thomas Y, Botebol H, Bouget F-Y, McQuaid JB et al..  2014.  A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake. Current Biology. 25:364–371.PDF icon Morrissey et al_2014_A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the.pdf (2.47 MB)
Dia A, Guillou L, Mauger S, Bigeard E, Marie D, Valero M, Destombe C.  2014.  Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate Alexandrium minutum. Molecular Ecology. 23:549–560.PDF icon Dia et al_2014_Spatiotemporal changes in the genetic diversity of harmful algal blooms caused.pdf (764.4 KB)
2013
Collen J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K et al..  2013.  Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Proceedings of the National Academy of Sciences. 110:5247–5252.PDF icon Collen et al_2013_Genome structure and metabolic features in the red seaweed Chondrus crispus.pdf (1012.43 KB)
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J et al..  2013.  The protist ribosomal reference database (PR2): a catalog of unicellular eukaryote small SubUnit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41:D597–D604.PDF icon Guillou et al_2013_The protist ribosomal reference database (PR2).pdf (266.2 KB)
2012
Balzano S, Marie D, Gourvil P, Vaulot D.  2012.  Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples. The ISME journal. 6:1480–1498.PDF icon Balzano et al_2012_Composition of the summer photosynthetic pico and nanoplankton communities in.pdf (1.01 MB)
Balzano S, Gourvil P, Siano R, Chanoine M, Marie D, Lessard S, Sarno D, Vaulot D.  2012.  Diversity of cultured photosynthetic flagellates in the North East Pacific and Arctic Oceans in summer. Biogeosciences. 9:4553–4571.PDF icon Balzano et al_2012_Diversity of cultured photosynthetic flagellates in the North East Pacific and.pdf (6.19 MB)
Stern RF, Andersen RA, Jameson I, Küpper FC, Coffroth M-A, Vaulot D, Le Gall F, Veron B, Brand JJ, Skelton H et al..  2012.  Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS ONE. 7:e42780.PDF icon Stern et al_2012_Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate.pdf (1.05 MB)
Stern RF, Andersen RA, Jameson I, Küpper FC, Coffroth M-A, Vaulot D, Le Gall F, Veron B, Brand JJ, Skelton H et al..  2012.  Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker. PLoS ONE. 7:e42780.PDF icon Stern et al_2012_Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate.pdf (1.05 MB)
Ota S, Vaulot D.  2012.  Lotharella reticulosa sp. nov.: A highly reticulated network forming chlorarachniophyte from the mediterranean sea. Protist. 163:91–104.PDF icon Ota_Vaulot_2012_Lotharella reticulosa sp.pdf (2.15 MB)

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