RCC references

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Courties C, Perasso R, Chrétiennot-Dinet M.-J., Gouy M, Guillou L, Troussellier M.  1998.  Phylogenetic analysis and genome size of Ostreococcus tauri (Chlorophyta, Prasinophyceae). Journal of Phycology. 34:844–849.
Henley WJ, Hironaka JL, Guillou L, Buchheim MA, Buchheim JA, Fawley MW, Fawley KP.  2004.  Phylogenetic analysis of the Nannochloris-like' algae and diagnoses of Picochlorum oklahomensis gen. et sp nov (Trebouxiophyceae, Chlorophyta). Phycologia. 43:641–652.PDF icon Henley et al_2004_Phylogenetic analysis of the '¡i¿Nannochloris¡-i¿-like' algae and diagnoses of.pdf (3.27 MB)
Rodriguez F, Feist SW, Guillou L, Harkestad LS, Bateman K, Renault T, Mortensen S.  2008.  Phylogenetic and morphological characterization of the green algae infesting blue mussel Mytilus edulis in the North and South Atlantic. Diseases of Aquatic Organisms. 81:231–240.
Tragin M, Santos ALopes dos, Christen R., Vaulot D..  2016.  Phylogenetic diversity and ecology of green micro algae in marine systems. Perspectives in Phycology. in pressPDF icon Tragin et al_2016_Phylogenetic diversity and ecology of green micro algae in marine systems.pdf (1.94 MB)
Minge MA, Shalchian-Tabrizi K, Torresen OK, Takishita K, Probert I, Inagaki Y, Klaveness D, Jakobsen KS.  2010.  A phylogenetic mosaic plastid proteome and unusual plastid-targeting signals in the green-colored dinoflagellate Lepidodinium chlorophorum. BMC Evolutionary Biology. 10:191.PDF icon Minge et al_2010_A phylogenetic mosaic plastid proteome and unusual plastid-targeting signals in.pdf (1.21 MB)
Marie D, Simon N, Vaulot D.  2005.  Phytoplankton cell counting by flow cytometry. Algal culturing techniques. :253–267.PDF icon Marie et al_2005_Phytoplankton cell counting by flow cytometry.pdf (518.75 KB)
Treusch AH, Demir-Hilton E, Vergin KL, Worden AZ, Carlson CA, Donatz MG, Burton RM, Giovannoni SJ.  2012.  Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids. The ISME journal. 6:481–492.PDF icon Treusch et al_2012_Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed.pdf (733.67 KB)
Decelle J, Romac S, Stern RF, Bendif EMahdi, Zingone A, Audic S, Guiry MD, Guillou L, Tessier D, Le Gall F et al..  2015.  PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy. Molecular Ecology Resources. 15:1435–1445.PDF icon Decelle et al_2015_PhytoREF.pdf (739.73 KB)
Worden AZ.  2006.  Picoeukaryote diversity in coastal waters of the Pacific Ocean. Aquatic Microbial Ecology. 43:165–175.PDF icon Worden_2006_Picoeukaryote diversity in coastal waters of the Pacific Ocean.pdf (224.04 KB)
Le Gall F, Rigaut-Jalabert F, Marie D, Garczareck L, Viprey M, Godet A, Vaulot D.  2008.  Picoplankton diversity in the south-east pacific ocean from cultures. Biogeosciences. 5:203–214.
Vandepoele K, Van Bel M, Richard G, Van Landeghem S, Verhelst B, Moreau H, Van de Peer Y, Grimsley N, Piganeau G.  2013.  pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology. 15:2147–2153.
Latasa M, Scharek R, Le Gall F, Guillou L, Le Gall F.  2004.  Pigment suites and taxonomic groups in Prasinophyceae. Journal of Phycology. 40:1149–1155.PDF icon Latasa et al_2004_Pigment suites and taxonomic groups in Prasinophyceae.pdf (32 KB)
Jouenne F, Probert I, Vaulot D.  2008.  Plankton taxonomy in the computer age. Cahiers de Biologie Marine. 49:355–367.PDF icon Jouenne et al_2008_Plankton taxonomy in the computer age.pdf (203.92 KB)
Khan H, Parks N, Kozera C, Curtis BA, Parsons BJ, Bowman S, Archibald JM.  2007.  Plastid genome sequence of the cryptophyte alga Rhodomonas salina CCMP1319: lateral transfer of putative DNA replication machinery and a test of chromist plastid phylogeny. Molecular Biology and Evolution. 24:1832–1842.
Clerissi C, Desdevises Y, Grimsley N.  2012.  Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species specific. Journal of Virology. 86:4611–4619.PDF icon Clerissi et al_2012_Prasinoviruses of the marine green alga Ostreococcus tauri are mainly species.pdf (894.33 KB)
Morel A, Ahn Y.-W., Partensky F, Vaulot D, Claustre H.  1993.  Prochlorococcus and Synechococcus: a comparative study of their size, pigmentation and related optical properties. Journal of Marine Research. 51:617–649.PDF icon Morel et al_1993_Prochlorococcus and Synechococcus.pdf (3.66 MB)
Russo GL, Langellotti AL, Blasco T, Oliviero M, Sacchi R, Masi P.  2021.  Production of Omega-3 Oil by Aurantiochytrium mangrovei Using Spent Osmotic Solution from Candied Fruit Industry as Sole Organic Carbon Source. Processes. 9:1834.PDF icon Russo et al. - 2021 - Production of Omega-3 Oil by Aurantiochytrium mang.pdf (2.12 MB)
Guillou L, Bachar D, Audic S, Bass D, Berney C, Bittner L, Boutte C, Burgaud G, de Vargas C, Decelle J et al..  2013.  The protist ribosomal reference database (PR2): a catalog of unicellular eukaryote small SubUnit rRNA sequences with curated taxonomy. Nucleic Acids Research. 41:D597–D604.PDF icon Guillou et al_2013_The protist ribosomal reference database (PR2).pdf (266.2 KB)
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Biegala IC, Not F, Vaulot D, Simon N.  2003.  Quantitative assessment of picoeucaryotes in the natural environment using taxon specific oligonucleotide probes in association with TSA-FISH (Tyramide Signal Amplification - Fluorescent In Situ Hybridization) and flow cytometry. Applied and Environmental Microbiology. 69:5519–5529.PDF icon Biegala et al_2003_Quantitative assessment of picoeucaryotes in the natural environment using.pdf (1.23 MB)
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Bendif EMahdi, Probert I, Díaz-Rosas F, Thomas D, van den Engh G, Young JR, von Dassow P.  2016.  Recent reticulate evolution in the ecologically dominant lineage of coccolithophores. Frontiers in Microbiology. 7PDF icon Bendif et al_2016_Recent reticulate evolution in the ecologically dominant lineage of.pdf (4.89 MB)
Laviale M, Neveux J.  2011.  Relationships between pigment ratios and growth irradiance in 11 marine phytoplankton species. Marine Ecology Progress Series. 425:63–77.PDF icon Laviale_Neveux_2011_Relationships between pigment ratios and growth irradiance in 11 marine.pdf (730.2 KB)
Rocap G, Distel DL, Waterbury JB, Chisholm SW.  2002.  Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences. Applied and Environmental Microbiology. 68:1180–1191.PDF icon Rocap et al_2002_Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S.pdf (360.24 KB)
Royer C, Gypens N, Cardol P, Borges AV, Roberty S.  2021.  Response of dimethylsulfoniopropionate (DMSP) and dimethylsulfoxide (DMSO) cell quotas to oxidative stress in three phytoplankton species. Journal of Plankton Research. 43:673–690.PDF icon Royer et al. - 2021 - Response of dimethylsulfoniopropionate (DMSP) and .pdf (1.4 MB)
Simon N, Foulon E, Grulois D, Six C, Desdevises Y, Latimier M, Le Gall F, Tragin M, Houdan A, Derelle E et al..  2017.  Revision of the genus micromonas manton et parke (chlorophyta, mamiellophyceae), of the type species m. pusilla (butcher) manton & parke and of the species m. commoda van baren, bachy and worden and description of two new species based on the genetic. Protist. 168:612–635.PDF icon Simon et al. - Revision of the Genus Micromonas Manton et Parke (Chlorophyta, Mamiellophyceae), of the Type Species M. pusilla (Butcher).pdf (7.29 MB)
Edvardsen B, Eikrem W, Throndsen J, A. S, Probert I, Medlin L.  2011.  Ribosomal DNA phylogenies and a morphological revision privide the basis for a new taxonomy of Prymnesiales (Haptophyta). European Journal of Phycology. 46:202–228.PDF icon Edvardsen et al_2011_Ribosomal DNA phylogenies and a morphological revision privide the basis for a.pdf (298.42 KB)

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