RCC references

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2015
Wheeler G, Ishikawa T, Pornsaksit V, Smirnoff N.  2015.  Evolution of alternative biosynthetic pathways for vitamin C following plastid acquisition in photosynthetic eukaryotes. eLife. 4:1–25.PDF icon Wheeler et al_2015_Evolution of alternative biosynthetic pathways for vitamin C following plastid.pdf (2.17 MB)
Schmidt M, Horn S, Ehlers K, Wilhelm C, Schnetter R.  2015.  Guanchochroma wildpretii gen. et spec. nov. (ochrophyta) provides new insights into the diversification and evolution of the algal class synchromophyceae.. PloS one. 10:e0131821.PDF icon Schmidt et al_2015_Guanchochroma wildpretii gen.pdf (4.34 MB)
Simmons MP, Bachy C, Sudek S, van Baren MJ, Sudek L, Ares M, Worden AZ.  2015.  Intron invasions trace algal speciation and reveal nearly identical Arctic and Antarctic Micromonas populations.. Molecular biology and evolution.
J Martínez M, Boere A, Gilg I, van Lent J, Witte H, van Bleijswijk J, Brussaard C.  2015.  New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla reveal a separate phylogenetic group. Aquatic Microbial Ecology. 74:17–28.PDF icon Martinez Martinez et al_2015_New lipid envelope-containing dsDNA virus isolates infecting Micromonas pusilla.pdf (560.57 KB)
2016
Simmons MP, Sudek S, Monier A, Limardo AJ, Jimenez V, Perle CR, Elrod VA, J. Pennington T, Worden AZ.  2016.  Abundance and biogeography of picoprasinophyte ecotypes and other phytoplankton in the eastern north pacific ocean. Applied and Environmental Microbiology. 82:1693–1705.PDF icon Simmons et al_2016_Abundance and biogeography of picoprasinophyte ecotypes and other phytoplankton.pdf (2.44 MB)
Waltman PH, Guo J, Reistetter ENahas, Purvine S, Ansong CK, van Baren MJ, Wong C-H, Wei C-L, Smith RD, Callister SJ et al..  2016.  Identifying aspects of the post-transcriptional program governing the proteome of the green alga micromonas pusilla.. PloS one. 11:e0155839.PDF icon Waltman et al_2016_Identifying aspects of the post-transcriptional program governing the proteome.pdf (1.69 MB)
Waltman PH, Guo J, Reistetter ENahas, Purvine S, Ansong CK, van Baren MJ, Wong C-H, Wei C-L, Smith RD, Callister SJ et al..  2016.  Identifying aspects of the post-transcriptional program governing the proteome of the green alga micromonas pusilla.. PloS one. 11:e0155839.PDF icon Waltman et al_2016_Identifying aspects of the post-transcriptional program governing the proteome.pdf (1.69 MB)
Waltman PH, Guo J, Reistetter ENahas, Purvine S, Ansong CK, van Baren MJ, Wong C-H, Wei C-L, Smith RD, Callister SJ et al..  2016.  Identifying aspects of the post-transcriptional program governing the proteome of the green alga micromonas pusilla.. PloS one. 11:e0155839.PDF icon Waltman et al_2016_Identifying aspects of the post-transcriptional program governing the proteome.pdf (1.69 MB)
Waltman PH, Guo J, Reistetter ENahas, Purvine S, Ansong CK, van Baren MJ, Wong C-H, Wei C-L, Smith RD, Callister SJ et al..  2016.  Identifying aspects of the post-transcriptional program governing the proteome of the green alga micromonas pusilla.. PloS one. 11:e0155839.PDF icon Waltman et al_2016_Identifying aspects of the post-transcriptional program governing the proteome.pdf (1.69 MB)
Durak GM, Taylor AR, Probert I, de Vargas C, Audic S, Schroeder DC, Brownlee C, Wheeler GL.  2016.  A role for diatom-like silicon transporters in calcifying coccolithophores. Nature Communications. 7:10543.PDF icon Durak et al_2016_A role for diatom-like silicon transporters in calcifying coccolithophores.pdf (1.95 MB)
Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury J-M, de Vargas C, Sieracki M, Iudicone D, Vaulot D et al..  2016.  Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6:37900.PDF icon Vannier et al_2016_Survey of the green picoalga Bathycoccus genomes in the global ocean.pdf (2.44 MB)
Lu Y, Wohlrab S, Groth M, Glöckner G, Guillou L, John U.  2016.  Transcriptomic profiling of Alexandrium fundyense during physical interaction with or exposure to chemical signals from the parasite Amoebophrya.. Molecular ecology. 25:1294–307.PDF icon Lu et al_2016_Transcriptomic profiling of Alexandrium fundyense during physical interaction.pdf (1.12 MB)
2017
Satjarak A, Graham LE.  2017.  Comparative DNA sequence analyses of Pyramimonas parkeae (Prasinophyceae) chloroplast genomes. Journal of Phycology. 53:415–424.PDF icon Satjarak_Graham_2017_Comparative DNA sequence analyses of Pyramimonas parkeae (Prasinophyceae).pdf (762.37 KB)
Walter JM, Coutinho FH, Dutilh BE, Swings J, Thompson FL, Thompson CC.  2017.  Ecogenomics and taxonomy of cyanobacteria phylum. Frontiers in Microbiology. 8PDF icon Walter et al_2017_Ecogenomics and taxonomy of cyanobacteria phylum.pdf (6.96 MB)
Kuhlisch C, Deicke M, Ueberschaar N, Wichard T, Pohnert G.  2017.  A fast and direct liquid chromatography-mass spectrometry method to detect and quantify polyunsaturated aldehydes and polar oxylipins in diatoms. Limnology and Oceanography: Methods. 15:70–79.PDF icon Kuhlisch et al_2017_A fast and direct liquid chromatography-mass spectrometry method to detect and.pdf (311.11 KB)
Weynberg KD, Allen MJ, Wilson WH.  2017.  Marine prasinoviruses and their tiny plankton hosts : A review. Viruses. :1–20.PDF icon Weynberg et al_2017_Marine prasinoviruses and their tiny plankton hosts.pdf (4.59 MB)
Weynberg KD, Allen MJ, Wilson WH.  2017.  Marine prasinoviruses and their tiny plankton hosts : A review. Viruses. :1–20.PDF icon Weynberg et al_2017_Marine prasinoviruses and their tiny plankton hosts.pdf (4.59 MB)
Balzano S, Percopo I, Siano R, Gourvil P, Chanoine M, Marie D, Vaulot D, Sarno D.  2017.  Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex. Journal of Phycology. 53:161–187.PDF icon Balzano et al_2017_Morphological and genetic diversity of Beaufort Sea diatoms with high.pdf (3.54 MB)
Parks M, Nakov T, Ruck E, Wickett NJ, Alverson AJ, Rice AL, Conservation P, Botanic C, Glencoe G.  2017.  Phylogenomics reveals an extensive history of genome duplication in diatoms (Bacillariophyta). American Journal of Botany. 105:1–18.PDF icon Parks et al_2017_Phylogenomics reveals an extensive history of genome duplication in diatoms.pdf (1.23 MB)
Limardo AJ, Sudek S, Choi CJae, Poirier C, Rii YM, Blum M, Roth R, Goodenough U, Church MJ, Worden AZ.  2017.  Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton. Environmental Microbiology. PDF icon Limardo et al_2017_Quantitative biogeography of picoprasinophytes establishes ecotype.pdf (2.02 MB)
Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MAkram, Partensky F, Worden AZ.  2017.  Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress. PLOS ONE. 12:e0172135.PDF icon Cuvelier et al_2017_Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet.pdf (3.4 MB)
2018
Cheng S, Melkonian M, Smith SA, Brockington S, Archibald JM, Delaux P-M, Li F-W, Melkonian B, Mavrodiev EV, Sun W et al..  2018.  10KP: A phylodiverse genome sequencing plan. GigaScience. 7:1–9.PDF icon Cheng et al_2018_10KP.pdf (6.53 MB)
Meng A, Corre E, Probert I, Gutierrez-Rodriguez A, Siano R, Annamale A, Alberti A, Da Silva C, Wincker P, Le Crom S et al..  2018.  Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network. Molecular Ecology. :0–2.PDF icon Meng et al_2018_Analysis of the genomic basis of functional diversity in dinoflagellates using.pdf (1.42 MB)
Annunziata R, Ritter A, Fortunato AEmidio, Cheminant-Navarro S, Agier N, Huysman MJJ, Winge P, Bones A, Bouget F-Y, Lagomarsino MCosentino et al..  2018.  A bHLH-PAS protein regulates light-dependent rhythmic processes in the marine diatom Phaeodactylum tricornutum. bioRxiv. :271445.PDF icon Annunziata et al_2018_A bHLH-PAS protein regulates light-dependent rhythmic processes in the marine.pdf (2.83 MB)
Farhat S, Florent I, Noel B, Kayal E, Da Silva C, Bigeard E, Alberti A, Labadie K, Corre E, Aury J-M et al..  2018.  Comparative time-scale gene expression analysis highlights the infection processes of two amoebophrya strains. Frontiers in Microbiology. 9:1–19.PDF icon Farhat et al_2018_Comparative time-scale gene expression analysis highlights the infection.pdf (2.61 MB)

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