Search references through taxonomy

You may search references here using RCC strains taxonomy. For example, you may search papers involving all Emiliania RCC strains. Note that results depend on references keywords (RCC tags) which will be updated progressively.

Reference
Gaignard C., Laroche C., Pierre G., Dubessay P., Delattre C., Gardarin C., Gourvil P., Probert I., Dubuffet A., Michaud P..  2019.  Screening of marine microalgae: Investigation of new exopolysaccharide producers. Algal Research. 44:101711.
Piganeau G, Moreau H.  2007.  Screening the Sargasso Sea metagenome for data to investigate genome evolution in Ostreococcus (Prasinophyceae, Chlorophyta). Gene. 406:184–190.
Castillo YM, Forn I, Yau S, Morán XAnxelu G, Alonso-Sáez L, Arandia-Gorostidi N, Vaqué D, Sebastián M.  2021.  Seasonal dynamics of natural Ostreococcus viral infection at the single cell level using VirusFISH. Environmental Microbiology. n/a
Sandaa R.-A., Larsen A.  2006.  Seasonal variations in virus-host populations in norwegian coastal waters: Focusing on the cyanophage community infecting marine synechococcus spp.. Applied and Environmental Microbiology. 72:4610–4618.
Parsy A, Sambusiti C, Baldoni-Andrey P, Périé F, Guyoneaud R.  2023.  Selection of photosynthetic microorganisms grown in artificial saline industrial effluents with liquid digestate: From screening to consortium cultures. Algal Research. :103061.
Hepach H, Hughes C, Hogg K, Collings S, Chance R.  2020.  Senescence as the main driver of iodide release from a diverse range of marine phytoplankton. Biogeosciences. 17:2453–2471.
Beaufort L, Probert I, de Garidel-Thoron T, Bendif EM, Ruiz-Pino D, Metzl N, Goyet C, Buchet N, Coupel P, Grelaud M et al..  2011.  Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature. 476:80–83.
Croteau D., Lacour T., Schiffrine N., Morin P.-I., Forget M.-H., Bruyant F., Ferland J., Lafond A., Campbell D.A, Tremblay J.-E. et al..  2022.  Shifts in growth light optima among diatom species support their succession during the spring bloom in the Arctic. Journal of Ecology. n/a
Tsuboi S, Yamaguchi H, Fuchida S, Koshikawa H, Kawachi M.  2019.  Short-term changes in marine prokaryotic and eukaryotic microalgal communities exposed to the leachate of a seafloor hydrothermal sulfide. Water, Air, & Soil Pollution. 230:175.
Sheward RM, Gebühr C, Bollmann J, Herrle JO.  2024.  Short-term response of Emiliania huxleyi growth and morphology to abrupt salinity stress.
Dedman CJ, Barton S, Fournier M, Rickaby REM.  2023.  Shotgun proteomics reveals temperature-dependent regulation of major nutrient metabolism in coastal Synechococcus sp. WH5701. Algal Research. :103279.
Jardillier L, Zubkov MV, Pearman J, Scanlan DJ.  2010.  Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean. The ISME Journal. 4:1180–1192.
Baines SB, Twining BS, Brzezinski Ma., Krause JW, Vogt S, Assael D, McDaniel H.  2012.  Significant silicon accumulation by marine picocyanobacteria. Nature Geoscience. 5:886–891.
Sanchez F, Geffroy S, Norest M, Yau S, Moreau H, Grimsley N.  2019.  Simplified transformation of ostreococcus tauri using polyethylene glycol. Genes. 10:399.
Das S, Gevaert F, Ouddane B, Duong G, Souissi S.  2021.  Single toxicity of arsenic and combined trace metal exposure to a microalga of ecological and commercial interest: Diacronema lutheri. Chemosphere. :132949.
Kashtan N, Roggensack SE, Rodrigue S, Thompson JW, Biller SJ, Coe A, Ding H, Marttinen P, Malmstrom RR, Stocker R et al..  2014.  Single-cell genomics reveals hundreds of coexisting subpopulations in wild prochlorococcus. Science. 344:416–420.
Chauhan N, Rickaby REM.  2024.  Size-dependent dynamics of the internal carbon pool drive isotopic vital effects in calcifying phytoplankton. Geochimica et Cosmochimica Acta. 373:35–51.
Dia A, Guillou L, Mauger S, Bigeard E, Marie D, Valero M, Destombe C.  2014.  Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate Alexandrium minutum. Molecular Ecology. 23:549–560.
Riou V, Périot M, Biegala IC.  2017.  Specificity re-evaluation of oligonucleotide probes for the detection of marine picoplankton by tyramide signal amplification-fluorescent in situ hybridization. Frontiers in Microbiology. 8:854.
Meyer EM, Langer G, Brownlee C, Wheeler GL, Taylor AR.  2020.  Sr in coccoliths of Scyphosphaera apsteinii: Partitioning behavior and role in coccolith morphogenesis. Geochimica et Cosmochimica Acta. 285:41–54.
Klintzsch T, Geisinger H, Wieland A, Langer G, Nehrke G, Bizic M, Greule M, Lenhart K, Borsch C, Schroll M et al..  2023.  Stable Carbon Isotope Signature of Methane Released from Phytoplankton. Geophysical Research Letters.
Müller MN, Krabbenhöft A, Vollstaedt H, Brandini FP, Eisenhauer A.  2018.  Stable isotope fractionation of strontium in coccolithophore calcite: Influence of temperature and carbonate chemistry. Geobiology. 16:297–306.
Ral JP, Derelle E, Ferraz C, Wattebled F, Farinas B, Corellou F, Buleon A, Slomianny MC, Delvalle D, D HC et al..  2004.  Starch division and partitioning. A mechanism for granule propagation and maintenance in the picophytoplanktonic green alga Ostreococcus tauri. Plant Physiology. 136:3333–3340.
Graeff JE, Leblond JD.  2021.  Sterol Composition of the Peridinioid Dinoflagellate Zooxanthella nutricula, A Symbiont of Polycystine Radiolarians. Protist. 172:125817.
Leblond JD, Elkins LC, Sabir K, Graeff JE.  2022.  Sterols of Testudodinium testudo (formerly Amphidinium testudo): Production of the Δ8(14) sterol gymnodinosterol and chemotaxonomic relationship to the Kareniaceae. Journal of Eukaryotic Microbiology. n/a:e12929.
Zhang Q, Charles PD, Bendif EMahdi, Hester SS, Mohammad S, Rickaby REM.  2023.  Stimulating and toxic effect of chromium on growth and photosynthesis of a marine chlorophyte. New Phytologist. n/a
Gebühr C, Sheward RM, Herrle JO, Bollmann J.  2021.  Strain-specific morphological response of the dominant calcifying phytoplankton species Emiliania huxleyi to salinity change. PLOS ONE. 16:e0246745.
Langer G, Nehrke G, Probert I, Ly J, Ziveri P.  2009.  Strain-specific responses of Emiliania huxleyi to changing seawater carbonate chemistry. Biogeosciences. 6:2637–2646.
Decelle J, Veronesi G, LeKieffre C, Gallet B, Chevalier F, Stryhanyuk H, Marro S, Ravanel S, Tucoulou R, Schieber N et al..  2021.  Subcellular architecture and metabolic connection in the planktonic photosymbiosis between Collodaria (radiolarians) and their microalgae. bioRxiv. :2021.03.13.435225.
Vannier T, Leconte J, Seeleuthner Y, Mondy S, Pelletier E, Aury J-M, de Vargas C, Sieracki M, Iudicone D, Vaulot D et al..  2016.  Survey of the green picoalga Bathycoccus genomes in the global ocean. Scientific Reports. 6:37900.
Wilson W, Zhang Q, Rickaby REM.  2019.  Susceptibility of algae to Cr toxicity reveals contrasting metal management strategies. Limnology and Oceanography. 64:2271–2282.
Guillou L, Chrétiennot-Dinet M.-J., Boulben S, van der Staay SYMoon-, Vaulot D.  1999.  Symbiomonas scintillans gen. et sp nov and Picophagus flagellatus gen. et sp nov (Heterokonta): Two new heterotrophic flagellates of picoplanktonic size. Protist. 150:383–398.
Toledo G, Palenik B.  1997.  Synechococcus diversity in the California current as seen by RNA polymerase (rpoC1) gene sequences of isolated strains.. Applied and environmental microbiology. 63:4298–4303.
Guyet U, Nguyen NA, Doré H, Haguait J, Pittera J, Conan M, Ratin M, Corre E, Le Corguillé G, Brillet-Guéguen L et al..  2020.  Synergic effects of temperature and irradiance on the physiology of the marine synechococcus strain WH7803. Frontiers in Microbiology. 11:1707.
Derilus D, Rahman MZ, Pinero F, Massey SE.  2020.  Synergism between the Black Queen effect and the proteomic constraint on genome size reduction in the photosynthetic picoeukaryotes. Scientific Reports. 10:8918.
Storti M, Hsine H, Uwizeye C, Bastien O, Yee DP, Chevalier F, Decelle J, Giustini C, Béal D, Curien G et al..  2023.  Tailoring confocal microscopy for real-time analysis of photosynthesis at single-cell resolution. Cell Reports Methods. :100568.
Kashiyama Y, Yokoyama A, Shiratori T, Hess S, Not F, Bachy C, Gutierrez-Rodriguez A, Kawahara J, Suzaki T, Nakazawa M et al..  2019.  Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth. The ISME Journal. :1.
Blocka Z.  2023.  Taxonomic profling of microbes co-cultured with protists in the Roscoff Culture Collection.
Ribeiro CGérikas, Santos ALopes dos, Probert I, Vaulot D, Edvardsen B.  2020.  Taxonomic reassignment of \textit{Pseudohaptolina birgeri comb. nov . (Haptophyta). Phycologia. in press:1–10.
Arin L, Reñé A, Gallisai R, Sarno D, Garcés E, Estrada M.  2022.  Taxonomic relationship between two small-sized Chaetoceros species (Bacillariophyta): C. tenuissimus and C. salsugineus , and comparison with C. olympicus sp. nov. from Catalan coastal waters (NW Mediterranean). European Journal of Phycology. 57:277–296.
Schmitt M, Telusma A, Bigeard E, Guillou L, Alves-de-Souza C.  2022.  Temperature Affects the Biological Control of Dinoflagellates by the Generalist Parasitoid Parvilucifera rostrata. Microorganisms. 10:385.
Rosas-Navarro A, Langer G, Ziveri P.  2016.  Temperature affects the morphology and calcification of Emiliania huxleyi strains. Biogeosciences. 13:2913–2926.
Rosas-Navarro A, Langer G, Ziveri P.  2018.  Temperature effects on sinking velocity of different Emiliania huxleyi strains. PLOS ONE. 13:e0194386.
Müller MN, Blanco-Ameijeiras S, Stoll HM, Méndez-Vicente A, Lebrato M.  2021.  Temperature Induced Physiological Reaction Norms of the Coccolithophore Gephyrocapsa oceanica and Resulting Coccolith Sr/Ca and Mg/Ca Ratios. Frontiers in Earth Science. 9:273.
Demory D, Arsenieff L, Simon N, Six C, Rigaut-jalabert F, Marie D, Ge P, Bigeard E, Jacquet S, Sciandra A et al..  2017.  Temperature is a key factor in Micromonas–virus interactions. The ISME Journal. 11:601–612.
Labban A, Palacio AS, García FC, Hadaidi G, Ansari MI, López-Urrutia Á, Alonso-Sáez L, Hong P-Y, Morán XAnxelu G.  2021.  Temperature Responses of Heterotrophic Bacteria in Co-culture With a Red Sea Synechococcus Strain. Frontiers in Microbiology. 12:612732.
Kulk G, De Vries P, Van De Poll WH, Visser RJW, Buma AGJ.  2012.  Temperature-dependent growth and photophysiology of prokaryotic and eukaryotic oceanic picophytoplankton. Marine Ecology Progress Series. 466:43–55.
Strauss J, Choi CJae, Grone J, Wittmers F, Jimenez V, Makareviciute-Fichtner K, Bachy C, Jaeger GSpiro, Poirier C, Eckmann C et al..  2023.  The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound diversity along salinity-driven gradients. Environmental Microbiology.
Robbens S, Derelle E, Ferraz C, Wuyts J, Moreau H, Van de Peer Y.  2007.  The complete chloroplast and mitochondrial DNA sequence of Ostreococcus tauri: organelle genomes of the smallest eukaryote are examples of compaction. Molecular Biology and Evolution. 24:956–968.
Saide A, Riccio G, Ianora A, Lauritano C.  2023.  The Diatom Cylindrotheca closterium and the Chlorophyll Breakdown Product Pheophorbide a for Photodynamic Therapy Applications. Applied Sciences. 13:2590.
Vaulot D, Eikrem W, Viprey M, Moreau H.  2008.  The diversity of small eukaryotic phytoplankton (¡3 µm) in marine ecosystems. 32:795–820.
Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J et al..  2003.  The genome of a motile marine Synechococcus. Nature. 424:1037–1042.
Zheng Q, Liu Y, Jeanthon C, Zhang R, Lin W, Yao J, Jiao N.  2016.  The geographic impact on genomic divergence as revealed by comparison of nine Citromicrobial genomes. Applied and Environmental Microbiology. 82:AEM.02495–16.
Karpowicz SJ, Prochnik SE, Grossman AR, Merchant SS.  2011.  The GreenCut2 resource, a phylogenomically derived inventory of proteins specific to the plant lineage. Journal of Biological Chemistry. 286:21427–21439.
Mauro N.  2024.  The influence of acclimation to density on organisms’ traits and population growth in \textit{Synechococcus sp. RS 9909.
Granata T, Habermacher P, Härri V, Egli M.  2019.  The influence of bio-optical properties of Emiliania huxleyi and Tetraselmis sp. on biomass and lipid production when exposed to different light spectra and intensities of an adjustable LED array and standard light sources. SN Applied Sciences. 1:524.
Tostevin R, Snow JT, Zhang Q, Tosca NJ, Rickaby REM.  2021.  The influence of elevated SiO2(aq) on intracellular silica uptake and microbial metabolism. Geobiology. n/a
Henry IA, Netzer R, Davies E, Brakstad OGunnar.  2021.  The influences of phytoplankton species, mineral particles and concentrations of dispersed oil on the formation and fate of marine oil-related aggregates. Science of the Total Environment. 752:141786.
Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, E Armbrust V, Archibald JM, Bharti AK, Bell CJ et al..  2014.  The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS biology. 12:e1001889.
Barbosa M, Inácio LGarcia, Afonso C, Maranhão P.  2023.  The microalga \textit{Dunaliella and its applications: a review. Applied Phycology. 4:99–120.
McDonald SM, Plant JN, Worden AZ.  2010.  The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of Micromonas. Molecular Biology and Evolution. 27:2268–2283.
Filatov DA, Bendif EMahdi, Archontikis OA, Hagino K, Rickaby REM.  2021.  The mode of speciation during a recent radiation in open-ocean phytoplankton. Current Biology.

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